Tree @master (Download .tar.gz)
History of
scripts
/
dict_ontology_standardization
@master
git clone https://klaus.systemreboot.net/bh20-seq-resource/
- esr_samples script refactoring; added a reference of the esr_samples script in the blog as an example of how to parse metadata AndreaGuarracino 5 years ago
- new countries; updated genbank/sra scripts to manage more specimen sources AndreaGuarracino 5 years ago
- added new New Zealand entries AndreaGuarracino 5 years ago
- sra script updated for managing more locations AndreaGuarracino 5 years ago
- fixed few countries ontology terms; added a new species AndreaGuarracino 5 years ago
- fixed protocol for the dictionary entries that caused validation problems AndreaGuarracino 5 years ago
- added new countries and speciesman sources: fixed few country entries AndreaGuarracino 5 years ago
- lots of new dictionary terms AndreaGuarracino 5 years ago
- other term for Homo sapiens (for SRA samples) Andrea Guarracino (commit: GitHub) 5 years ago
- if the technology is not found, the YAML file is not created; managed longer species strings AndreaGuarracino 5 years ago
- fix ncbi_countries dictionary AndreaGuarracino 5 years ago
- new terms in the ncbi_countries dictionary Andrea Guarracino (commit: AndreaGuarracino) 5 years ago
- two more terms in the ncbi_sequencing_technology dictionary Andrea Guarracino (commit: GitHub) 5 years ago
- new terms in the sequencing_technology dictionary Andrea Guarracino (commit: GitHub) 5 years ago
- added new dictionary entries AndreaGuarracino 5 years ago
- new entries for the EBI samples AndreaGuarracino 5 years ago
- corrected the wrong entities Andrea Guarracino (commit: GitHub) 5 years ago
- species dictionary Andrea Guarracino (commit: GitHub) 5 years ago
- the script is more verbose; added other countries AndreaGuarracino 5 years ago
- Added new speciesman sources Andrea Guarracino (commit: GitHub) 5 years ago
- Added new sequencing technologies Andrea Guarracino (commit: GitHub) 5 years ago
- Added new countries Andrea Guarracino (commit: GitHub) 5 years ago
- Reverting country list back, something went wrong there lltommy 5 years ago
- Updated with new terms Andrea Guarracino (commit: GitHub) 5 years ago
- Updated with new terms Andrea Guarracino (commit: GitHub) 5 years ago
- Updating dics lltommy 6 years ago
- added nasal swab for several new IDs Andrea Guarracino (commit: GitHub) 6 years ago
- Adding a third sequence technology option lltommy 6 years ago
- created dict for host health status Andrea Guarracino (commit: GitHub) 6 years ago
- added some rows in the speciesman dict Andrea Guarracino (commit: GitHub) 6 years ago