Tree @master (Download .tar.gz)
- ..
- arvados-and-samtools-dockerfile
- abpoa.cwl
- arv-main.cwl
- collect-seqs.cwl
- collect-seqs.py
- dups2metadata.cwl
- dups2metadata.py
- from_sparql.cwl
- from_sparql.py
- merge-metadata.cwl
- merge-metadata.py
- odgi-build-from-xpoa-gfa.cwl
- odgi-build.cwl
- odgi_to_rdf.cwl
- pangenome-generate.cwl
- pangenome-generate_abpoa.cwl
- pangenome-generate_spoa.cwl
- query-to-gfa.cwl
- relabel-seqs.cwl
- relabel-seqs.py
- seqwish.cwl
- sort_fasta_by_quality_and_len.cwl
- sort_fasta_by_quality_and_len.py
- spoa.cwl
- testjob.yml
History of
workflows
/
pangenome-generate
/
pangenome-generate.cwl
@master
git clone https://klaus.systemreboot.net/bh20-seq-resource/
- Can have list of sequence labels to exclude from combined fasta Peter Amstutz 5 years ago
- Workflow fixes Peter Amstutz 5 years ago
- preserve the directory layout of segmentation.py Michael R. Crusoe 5 years ago
- move some tools into the shared repo Michael R. Crusoe 5 years ago
- add pangenome browser prep Michael R. Crusoe 5 years ago
- Add readsMergeDedup.fasta to output Peter Amstutz 6 years ago
- Better handling of duplicate sequences Peter Amstutz 6 years ago
- Relabel sequences to match metadata subjects. Peter Amstutz 6 years ago
- Move workflows into main repo Peter Amstutz 6 years ago