systemreboot git repos bh20-seq-resource / master workflows / pubseq / normalize
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Tree @master (Download .tar.gz)

Normalization steps

This library contains generic logic to normalize (string) data and transforms strings to URIs. It should be applicable to data from any source (GenBank, ENA etc).

Important: missing data should be missing or None! Do not fill in data by 'guessing'.

When data is malformed a warning should be logged and added to the warning list. Functions should be small enough to return only 1 warning!

Pjotr Prins (c) 2021


History of workflows / pubseq / normalize @master git clone https://klaus.systemreboot.net/bh20-seq-resource/