Tree @master (Download .tar.gz)
History of
bh20sequploader
@master
git clone https://klaus.systemreboot.net/bh20-seq-resource/
- RDF: use URIs Pjotr Prins 5 years ago
- Fixed the License error (https!!) Pjotr Prins 5 years ago
- Uploader script improvements Pjotr Prins 5 years ago
- fixed sequence_assembly_method field description AndreaGuarracino 5 years ago
- Commented in uploader main.py Pjotr Prins 5 years ago
- sequence divergence to 5% for minimap2 in the FASTA quality control AndreaGuarracino 5 years ago
- show more information in the error messages AndreaGuarracino 5 years ago
- fixed bugs in in index management and type conversion AndreaGuarracino 5 years ago
- local QC is optional AndreaGuarracino 5 years ago
- added control (locally and in the validation) that sample_id has to be the same in the metadata and in the FASTA header #103 AndreaGuarracino 5 years ago
- qc_fasta returns also the seq_type; verified that only one FASTA is sent at a time; code cleaning AndreaGuarracino 5 years ago
- fixed local QC, modifying the regex for FASTA/FASTQ to be more general AndreaGuarracino 5 years ago
- updated parameter name AndreaGuarracino 5 years ago
- typos in the code; little code refactoring AndreaGuarracino 5 years ago
- reverted the relaxation on the location attribute AndreaGuarracino 5 years ago
- Relaxing the location attribute Pjotr Prins 5 years ago
- Report similarity == 0 Peter Amstutz 5 years ago
- Improve uploader reporting. Peter Amstutz 5 years ago
- Make license optional Peter Amstutz 5 years ago
- Make license optional for now Peter Amstutz 5 years ago
- Make license optional for now Pjotr Prins 5 years ago
- License RDF Pjotr Prins 5 years ago
- Add RDF output Pjotr Prins 5 years ago
- Web: add license to input form Pjotr Prins 5 years ago
- Add ontology and schema for license information. For review. Pjotr Prins 5 years ago
- Try to fix lab_address wrong predicate, fix submitter shape on the way and hopefully brought it in synch with the yaml lltommy 5 years ago
- Give uploader an option to trust local validation (for batch imports) Peter Amstutz 5 years ago
- Uploader checks for duplicates Peter Amstutz 5 years ago
- Avoid redundant loading of schema Peter Amstutz 5 years ago
- Hack in a valid-uri check Peter Amstutz 5 years ago