Tree @master (Download .tar.gz)
History of
bh20sequploader
@master
git clone https://klaus.systemreboot.net/bh20-seq-resource/
- minimap2 returns nothing when there is no alignment. Peter Amstutz 5 years ago
- Use minimap2 instead of clustalw for fasta QC Peter Amstutz 5 years ago
- Add bh20-seq-analyzer --print-status Peter Amstutz 5 years ago
- Add --skip-qc for faster batch import Peter Amstutz 5 years ago
- Adding --skip-qc Peter Amstutz 5 years ago
- Fix qc_fasta bug closing stream. Peter Amstutz 5 years ago
- Fix single arg upload Peter Amstutz 5 years ago
- Better invalid sequence QC handling Peter Amstutz 5 years ago
- Handle upload & assembly of gzipped, paired-end fastq Peter Amstutz 5 years ago
- Changed doc comment in schema Pjotr Prins 5 years ago
- Improved error output for the web uploader Pjotr Prins 5 years ago
- Web: debugging metadata submission Pjotr Prins 5 years ago
- Uploader: validate metadata first (it is faster) Pjotr Prins 5 years ago
- Adding additional frontend option (PATO_0001340) to QC lltommy 5 years ago
- Handle running in a container with no username Peter Amstutz 5 years ago
- Last addition/edits to the meta data schema lltommy 5 years ago
- Use subprocess invocation is backwards compatible with Python 3.5 Peter Amstutz 5 years ago
- Add reference Peter Amstutz 5 years ago
- Merge branch 'master' of https://github.com/arvados/bh20-seq-resource lltommy 5 years ago
- Decision to settle for float instead of integers for the coverage lltommy 5 years ago
- Call clustalw to compare sequence to reference Peter Amstutz 5 years ago
- Changes to the structure - we use lists now instead of strings where it makes sense. This allows us to have multiple values where in makes sense lltommy 5 years ago
- adding a submitter comment field lltommy 6 years ago
- Adding a third sequence technology option lltommy 6 years ago
- Merge branch 'master' into patch-3 LLTommy (commit: GitHub) 6 years ago
- Fixing ShEx expression, one ? too much lltommy 6 years ago
- Forgot to add _id lltommy 6 years ago
- Including restrictions to the host status lltommy 6 years ago
- Small changes all around, trying to make the importer/metadata better lltommy 6 years ago
- Work around CWL content size limit by chunking Peter Amstutz 6 years ago